MedPy is a library and script collection for medical image processing in Python, providing basic functionalities for reading, writing and manipulating large images of arbitrary dimensionality.
Its main contributions are n-dimensional versions of popular image filters, a collection of image feature extractors, ready to be used with scikit-learn, and an exhaustive n-dimensional graph-cut package.
MedPy utilises NiBabel, PyDicom, and ITK to provide image import/export capabilities for many image formats. Docker containers are available with all dependencies.