| fMRIPrep |
fMRI data preprocessing pipeline |
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| AFNI |
Popular FMRI Display and Analysis program |
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| FSL |
Image analysis and statistical tools for FMRI, MRI and DTI |
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| BioImage Suite |
Comprehensive suite of neuro/cardiac analysis programs |
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| SPM |
Statistical Parametric Mapping for functional neuroimaging |
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| NiPype |
Python pipeline for multiple analysis packages |
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| BrainSuite |
Human brain MR analysis tools |
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| DiPy: Diffusion MR Imaging in Python |
Diffusion MRI (dMRI) analysis in Python |
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| FreeSurfer |
Tools for brain cortical surface reconstruction. |
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| MedINRIA |
Advanced image visualization and analysis for Windows/Mac/Linux |
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